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Breeden Lab- Yeast Cell Cycle
Methods
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Breeden Lab, Chromatin IP (CHIP assay)
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Breeden Lab, Chromosomal DNA prep
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Breeden Lab, DNaseI footprinting
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Breeden Lab, E. coli transformation
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Breeden Lab, Northern Blot
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Breeden Lab, RNA miniprep
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Breeden Lab, SDS-PAGE
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Breeden Lab, Western Blotting
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Breeden Lab, Yeast colony PCR
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Breeden Lab, competent E.coli
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Breeden Lab, coupling antibodies to protein A or G
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Breeden Lab, differential dispaly
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Breeden Lab, genomic DNA miniprep
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Breeden Lab, mRNA purification
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Breeden Lab, mRNA purification
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Breeden Lab, method
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Breeden Lab, method
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Breeden Lab, plasmid DNA miniprep
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Breeden Lab, s1 assay
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Breeden Lab, yeast transformation
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Breeden Lab, yeasts - FACS
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Breeden Lab, yeasts - FACS-Sytox
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Breeden Lab, ß-GAL filter assay
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SDS - Polyacrylamide
Gels
Separation gel:
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for 10 ml |
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for 20 ml |
| Gel % |
6.0 |
7.5 |
8.0 |
10 |
12 |
|
6.0 |
7.5 |
8.0 |
10 |
12 |
| 4 x lower buffer
(in ml) |
2.5 |
2.5 |
2.5 |
2.5 |
2.5 |
|
5.0 |
5.0 |
5.0 |
5.0 |
5.0 |
40 % (30 : 0.8) acrylamide/
bisacrylamide (in ml) |
1.5 |
1.9 |
2.0 |
2.5 |
3.0 |
|
3.0 |
3.8 |
4.0 |
5.0 |
6.0 |
| H2O
(in ml) |
6.0 |
5.6 |
5.5 |
5.0 |
4.5 |
|
12.0 |
11.2 |
11.0 |
10.0 |
9.0 |
| APS (25 %) in
µl |
30 |
30 |
30 |
30 |
30 |
|
60 |
60 |
60 |
60 |
60 |
| TEMED in µl |
15 |
15 |
15 |
15 |
15 |
|
30 |
30 |
30 |
30 |
30 |
5 % stacking gel:
| 4 x upper buffer
(in ml) |
1.25 |
2.5 |
40 % (30 : 0.8) acrylamide/
bisacrylamide (in µl) |
625 |
1250 |
| H2O
(in ml) |
3.1 |
6.25 |
| APS (25 %) in
µl |
30 |
60 |
| TEMED in µl |
15 |
30 |
Buffers:
4 x lower buffer: 1.5 M Tris/HCl pH
8.8; 0.4% SDS.
[for 500ml: 91 g Tris/HCl; 2 g SDS]
4 x upper buffer: 0.5 M Tris/HCl pH
6.8; 0.4% SDS.
[for 500ml: 30.4 g Tris/HCl; 2 g SDS]
10 x running buffer: 0.25 M Tris;
2 M Glycin; 1 % SDS.
[for 1 l: 30.4 g Tris; ; 150 g Glycin; 10 g SDS]
2 x loading buffer (reducing): 80
mM Tris/HCl pH 6.8; 10 % Mercaptoethanol;
2 % SDS; 10 % Glycerin; Bromphenol Blue.
[for 10 ml: 800 µl 1 M Tris/HCl pH 6.8; 1 ml Mercaptoethanol;
2 ml 10 % SDS; 2 ml 50 % Glycerin, Bromphenol Blue]
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