Pathguide: the pathway resource list
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Complete Listing of All Pathguide Resources

Pathguide contains information about 240 biological pathway resources. Click on a link to go to the resource home page or 'Details' for a description page. Databases that are free and those supporting BioPAX, CellML, PSI-MI or SBML standards are respectively indicated.

If you know of a pathway resource that is not listed here, or have other questions or comments, please send us an e-mail.
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Protein-Protein Interactions  
Database Name (Order: ) Full Record Availability Standards
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Metabolic Pathways  
Database Name (Order: ) Full Record Availability Standards
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Signaling Pathways  
Database Name (Order: ) Full Record Availability Standards
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Pathway Diagrams  
Database Name (Order: ) Full Record Availability Standards
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Transcription Factors / Gene Regulatory Networks  
Database Name (Order: ) Full Record Availability Standards
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Protein-Compound Interactions  
Database Name (Order: ) Full Record Availability Standards
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Genetic Interaction Networks  
Database Name (Order: ) Full Record Availability Standards
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Protein Sequence Focused  
Database Name (Order: ) Full Record Availability Standards
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Other  
Database Name (Order: ) Full Record Availability Standards
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Note on Web Popularity:
As indexed by Google, popularity is estimated by the number of web pages that mention each resource's homepage (subtracting links from the resource itself). This number provides a rough indication of the relative popularity of each resource; this should not be interpreted as an accurate measure of resource significance.
There are a number of reasons why a resource may have no links, such as: it may be a very new resource and no pages link to it yet; it may have been recently relocated and no links point to the new location; it may be a private resource and no links point to the brochure page; it may be a defunct resource without a valid link.
Thanks to Robert Hoffmann for help updating the Google ranking.

"Pathguide: the pathway resource list" is maintained by Gary Bader, now in the Bader lab, formerly in the Sander group at Memorial Sloan-Kettering Cancer Center.
The website was originally created by Michael Cary in the Sander group and was significantly updated and redesigned by Vuk Pavlovic in the Bader Lab.
Thanks to Emek Demir for the Pathguide name.

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