1: MANF mesencephalic astrocyte-derived neurotrophic factor [ Homo sapiens ]

GeneID: 7873 updated 6-Mar-2010

[Top][Help]Summary

Official Symbol
MANFprovided by HGNC
Official Full Name
mesencephalic astrocyte-derived neurotrophic factorprovided by HGNC
Primary source
HGNC:15461
See related
Ensembl:ENSG00000145050; HPRD:03558; MIM:601916
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
ARP; ARMET; MGC142148; MGC142150; MANF
Summary
The protein encoded by this gene is localized in the endoplasmic reticulum (ER) and golgi, and is also secreted. Reducing expression of this gene increases susceptibility to ER stress-induced death and promotes cell proliferation. The protein was initially thought to be longer at the N-terminus and to contain an arginine-rich region but transcribed evidence indicates a smaller open reading frame that does not encode the arginine tract. The presence of a specific mutation changing the previously numbered codon 50 from ATG to AGG, or deletion of that codon, has been reported in a variety of solid tumors. With the protein size correction, this codon is now identified as the initiation codon. [provided by RefSeq]

[Top][Help]Genomic regions, transcripts, and products

(plus) Go to reference sequence detailsTry our new Sequence Viewer


[Top][Help]Genomic context

chromosome: 3;Â?Location: 3p21.1See MANF in MapViewer

[Top][Help]Bibliography

Related Articles in PubMed

GeneRIFs: Gene References Into Function What's a GeneRIF?

PubMed 1. The widespread expression of MANF together with its evolutionary conserved nature and regulation by brain insults suggest that it has important functions both under normal and pathological conditions in many tissue types.
PubMed 2. structures of MANF and CDNF were solved; structure explains why MANF and CDNF are bifunctional; neurotrophic activity may reside in the N-terminal domain and ER stress response in the C-terminal domain
PubMed 3. Armet is a novel secreted mediator of the adaptive pathway of unfolded protein response.

[Top][Help]General gene information

Markers

NoName(e-PCR)
Links: UniSTS:490262
RH1498(e-PCR)
Links: UniSTS:33307
D17914(e-PCR)
Links: UniSTS:124739
D3S4001(e-PCR)
Links: UniSTS:72281
RH12752(e-PCR)
Links: UniSTS:15480
SGC32878(e-PCR)
Links: UniSTS:38026
D3S3306E(e-PCR)
Links: UniSTS:153740
D3S1679(e-PCR)
Links: UniSTS:154299

Phenotypes

Pancreatic cancer
MIM: 260350

Homology

Homologs of the MANF gene The MANF gene is conserved in chimpanzee, dog, cow, mouse, rat, zebrafish, fruit fly, mosquito, and C.elegans.


Map Viewer (Mouse, Rat)

Gene Ontology Provided by GOA

Function Evidence
growth factor activity IEA Â?Â?
molecular_function ND Â?Â?
Process Evidence
biological_process ND Â?Â?
response to unfolded protein IEA Â?Â?
Component Evidence
cellular_component ND Â?Â?
extracellular region IEA Â?Â?

[Top][Help]General protein information

Preferred Names
mesencephalic astrocyte-derived neurotrophic factor
Names
mesencephalic astrocyte-derived neurotrophic factor
arginine-rich protein
arginine-rich, mutated in early stage tumors

[Top][Help]NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

Genomic

  1. NG_012652.1Â?RefSeqGene

    Range
    5000..9125
    Download
    GenBank FASTA Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_006010.3 → NP_006001.2 �mesencephalic astrocyte-derived neurotrophic factor

    Source sequence(s)
    BC007282,CN410911
    Consensus CDS
    CCDS46836.1
    UniProtKB/TrEMBL
    A8K878
    UniProtKB/Swiss-Prot
    P55145
    Related Ensembl
    ENSP00000273628, ENST00000273628
    Conserved Domains (1) summary
    pfam10208
    Location:32 – 185
    Blast Score: 650
    Armet; Degradation arginine-rich protein for mis-folding

RefSeqs of Annotated Genomes: Build 37.1

The following sections contain reference sequences that belong to a specific genome build. Explain

Genome Reference Consortium Human Build 37 (GRCh37), Primary_Assembly

Genomic

  1. NC_000003.11

    Range
    51422702..51426774
    Download
    GenBank FASTA Sequence Viewer (Graphics)
  2. NT_022517.18Â?

    Range
    51362702..51366774
    Download
    GenBank FASTA Sequence Viewer (Graphics)

Alternate assembly (Celera)

Genomic

  1. AC_000046.1

    Range
    51397056..51401128
    Download
    GenBank FASTA Sequence Viewer (Graphics)
  2. NW_921651.1Â?

    Range
    51397056..51401128
    Download
    GenBank FASTA Sequence Viewer (Graphics)

Alternate assembly (HuRef)

Genomic

  1. AC_000135.1

    Range
    51479930..51484002, complement
    Download
    GenBank FASTA Sequence Viewer (Graphics)
  2. NW_001838877.2Â?

    Range
    14783659..14787731, complement
    Download
    GenBank FASTA Sequence Viewer (Graphics)

[Top][Help]Related Sequences

Â?Â?Nucleotide Â?Â?Protein
Â?Â?genomic Â?Â?AC092037.2Â?Â?(7145..11217) Â?Â?None
Â?Â?genomic Â?Â?CH471055.1 Â?Â?EAW65138.1
Â?Â?mRNA Â?Â?AK292243.1 Â?Â?BAF84932.1
Â?Â?mRNA Â?Â?BC007282.1 Â?Â?AAH07282.1
Â?Â?mRNA Â?Â?BC033055.1 Â?Â?None
Â?Â?mRNA Â?Â?BC113588.1 Â?Â?AAI13589.1
Â?Â?mRNA Â?Â?BC113590.1 Â?Â?AAI13591.1
Â?Â?mRNA Â?Â?BT007110.1 Â?Â?AAP35774.1
Â?Â?mRNA Â?Â?CN410911.1 Â?Â?None
Â?Â?mRNA Â?Â?M83751.1 Â?Â?AAB08753.1
Â?Â?other-genetic Â?Â?EU832655.1 Â?Â?ACE87746.1
Â?Â?other-genetic Â?Â?EU832733.1 Â?Â?ACE87065.1
Protein Accession Â?Â?Links
P55145.2 Â?Â?GenPept Â?Â?UniProtKB/Swiss-Prot:P55145

[Top][Help]Additional Links

Gene LinkOut

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