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GREAT improves functional interpretation of cis-regulatory regions
Cory Y McLean, Dave Bristor, Michael Hiller, Shoa L Clarke, Bruce T Schaar, Craig B Lowe, Aaron M Wenger, Gill Bejerano
Nature Biotechnology 28, 495-501 (2 May 2010) doi:10.1038/nbt.1630 Research
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Computational screening of conserved genomic DNA in search of functional noncoding elements
Gill Bejerano, Adam C Siepel, W James Kent, David Haussler
Nature Methods 2, 535-545 (July 2005) doi:10.1038/nmeth0705-535 Protocol
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A distal enhancer and an ultraconserved exon are derived from a novel retroposon
Gill Bejerano, Craig B. Lowe, Nadav Ahituv, Bryan King, Adam Siepel, Sofie R. Salama, Edward M. Rubin, W. James Kent, David Haussler
Nature 441, 87-90 (16 April 2006) doi:10.1038/nature04696 Letter
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Human-specific loss of regulatory DNA and the evolution of human-specific traits
Cory Y. McLean, Philip L. Reno, Alex A. Pollen, Abraham I. Bassan, Terence D. Capellini, Catherine Guenther, Vahan B. Indjeian, Xinhong Lim, Douglas B. Menke, Bruce T. Schaar, et al.
Nature 471, 216-219 (9 March 2011) doi:10.1038/nature09774 Letter
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