This page contains 3D structural models (Version 3,
built on August 2014) of 1,026 putative G protein-coupled receptors
(GPCRs) in the human genome
generated by the
GPCR-I-TASSER pipeline.
In GPCR-I-TASSER, the GPCR sequences are first threaded through the GPCR template library to
identify muliple structure templates by the LOMETS
programs.
When close homolgous templates are identified, full-length models will be constructed by the
I-TASSER based fragment assembly simulations,
assisted by a GPCR and membrane specific force field and spatial restraints collected from
mutagenesis experiments in GPCR-RD.
In case that homologous templates are not available,
an ab initio folding procedure is used to assemble the 7-TM-helix bundle from
scratch, followed by the GPCR-I-TASSER fragment reassembly simulations.
For multiple domain GPCRs, structural models are built by GPCR-I-TASSER for each domain separately
which are then reassembly by the I-TASSER approach.
All the models are finally subjected to FG-MD
for fragment-guided molecular dynamic simulation refinements.
Note:
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Other GPCR-related resources
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HG ID | UniProt ID | Length | C-score | Estimated TM-score |
Estimated RMSD |
Top 5 models |
HG0001 | Q92847 | 366 | 0.29 | 0.75 ± 0.10 | 6.00 ± 3.70 | |
HG0002 | B9EIL6 | 312 | -0.23 | 0.68 ± 0.12 | 6.80 ± 4.00 | |
HG0003 | Q8WZA6 | 343 | -1.50 | 0.53 ± 0.15 | 9.90 ± 4.60 | |
HG0004 | P30872 | 391 | -0.53 | 0.65 ± 0.13 | 7.90 ± 4.40 | |
HG0005 | Q6IFB0 | 361 | -1.45 | 0.54 ± 0.15 | 9.90 ± 4.60 | |
HG0006 | Q8NGC2 | 313 | -0.20 | 0.69 ± 0.12 | 6.70 ± 4.00 | |
HG0007 | Q96R27 | 311 | -0.02 | 0.71 ± 0.12 | 6.30 ± 3.90 | |
HG0008 | Q17RS1 | 320 | -0.30 | 0.67 ± 0.12 | 7.00 ± 4.10 | |
HG0009 | Q9H340 | 312 | 0.02 | 0.72 ± 0.11 | 6.20 ± 3.80 | |
HG0010 | A0N0Q0 | 378 | -0.32 | 0.67 ± 0.13 | 7.40 ± 4.20 |
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